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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
P18085
USC-OGP 2-DE database
:
P18085
P18085
General information about the entry
View entry in simple text format
Entry name
ARF4_HUMAN
Primary accession number
P18085
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=ADP-ribosylation factor 4;.
Gene name
Name=ARF4
Synonyms=ARF2
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
UVEAL_MELANOMA_3-10
{UVEAL MELANOMA 3-10}
Homo sapiens (Human)
map experimental info
UVEAL_MELANOMA_3-10
MAP LOCATIONS:
SPOT OGP-1316
:
pI=6.18; Mw=19834
SPOT OGP-1331
:
pI=5.13; Mw=16684
Cross-references
UniProtKB/Swiss-Prot
P18085; ARF4_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
ARF4_HUMAN
Primary accession number
P18085
Secondary accession number(s)
B2R7J7 P21371
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
March 15, 2017 (version 181)
Name and origin of the protein
Description
RecName: Full=ADP-ribosylation factor 4;
Gene name
Name=ARF4
Synonyms=ARF2
Encoded on
Name=ARF4; Synonyms=ARF2
Keywords
3D-structure
;
Complete proteome
;
ER-Golgi transport
;
Golgi apparatus
;
GTP-binding
;
Lipoprotein
;
Membrane
;
Myristate
;
Nucleotide-binding
;
Phosphoprotein
;
Polymorphism
;
Protein transport
;
Reference proteome
;
Transport
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
M36341; AAA53081.1
; -; mRNA
EMBL
AF104238; AAD54674.1
; -; Genomic_DNA
EMBL
AF104233; AAD54674.1
; JOINED; Genomic_DNA
EMBL
AF104234; AAD54674.1
; JOINED; Genomic_DNA
EMBL
AF104235; AAD54674.1
; JOINED; Genomic_DNA
EMBL
AF104236; AAD54674.1
; JOINED; Genomic_DNA
EMBL
AF104237; AAD54674.1
; JOINED; Genomic_DNA
EMBL
AF493883; AAM12597.1
; -; mRNA
EMBL
AK313008; BAG35844.1
; -; mRNA
EMBL
BC003364; AAH03364.1
; -; mRNA
EMBL
BC008753; AAH08753.1
; -; mRNA
EMBL
BC016325; AAH16325.1
; -; mRNA
EMBL
BC022866; AAH22866.1
; -; mRNA
CCDS
CCDS2884.1; -
; .
PIR
B38622; B38622
; .
RefSeq
NP_001651.1; NM_001660.3
; .
UniGene
Hs.652183; -
; .
PDB
1Z6X; X-ray
; 2.70 A; A/B=1-180
PDBsum
1Z6X; -
; .
ProteinModelPortal
P18085; -
; .
SMR
P18085; -
; .
BioGrid
106873; 47
; .
DIP
DIP-38214N; -
; .
IntAct
P18085; 13
; .
MINT
MINT-2801449; -
; .
STRING
9606.ENSP00000306010; -
; .
DrugBank
DB04315; Guanosine-5'-Diphosphate
; .
iPTMnet
P18085; -
; .
PhosphoSitePlus
P18085; -
; .
SwissPalm
P18085; -
; .
BioMuta
ARF4; -
; .
DMDM
114123; -
; .
EPD
P18085; -
; .
MaxQB
P18085; -
; .
PaxDb
P18085; -
; .
PeptideAtlas
P18085; -
; .
PRIDE
P18085; -
; .
TopDownProteomics
P18085; -
; .
DNASU
378; -
; .
Ensembl
ENST00000303436; ENSP00000306010
; ENSG00000168374; .
GeneID
378; -
; .
KEGG
hsa:378; -
; .
UCSC
uc003dix.5; human
; .
CTD
378; -
; .
DisGeNET
378; -
; .
GeneCards
ARF4; -
; .
HGNC
HGNC:655; ARF4
; .
MIM
601177; gene
; .
neXtProt
NX_P18085; -
; .
OpenTargets
ENSG00000168374; -
; .
PharmGKB
PA24937; -
; .
eggNOG
KOG0070; Eukaryota
; .
eggNOG
COG1100; LUCA
; .
GeneTree
ENSGT00780000121855; -
; .
HOGENOM
HOG000163691; -
; .
HOVERGEN
HBG002073; -
; .
InParanoid
P18085; -
; .
KO
K07939; -
; .
OMA
WASSEIF; -
; .
OrthoDB
EOG091G0S7S; -
; .
PhylomeDB
P18085; -
; .
TreeFam
TF300808; -
; .
Reactome
R-HSA-5620916; VxPx cargo-targeting to cilium
; .
Reactome
R-HSA-6807878; COPI-mediated anterograde transport
; .
Reactome
R-HSA-6811434; COPI-dependent Golgi-to-ER retrograde traffic
; .
ChiTaRS
ARF4; human
; .
EvolutionaryTrace
P18085; -
; .
GeneWiki
ARF4; -
; .
GenomeRNAi
378; -
; .
PRO
PR:P18085; -
; .
Proteomes
UP000005640; Chromosome 3
; .
Bgee
ENSG00000168374; -
; .
CleanEx
HS_ARF4; -
; .
ExpressionAtlas
P18085; baseline and differential
; .
Genevisible
P18085; HS
; .
GO
GO:0005829; C:cytosol
; IDA:UniProtKB; .
GO
GO:0043197; C:dendritic spine
; IDA:MGI; .
GO
GO:0070062; C:extracellular exosome
; IDA:UniProtKB; .
GO
GO:0031012; C:extracellular matrix
; IDA:BHF-UCL; .
GO
GO:0005794; C:Golgi apparatus
; IEA:UniProtKB-SubCell; .
GO
GO:0016020; C:membrane
; IDA:UniProtKB; .
GO
GO:0032587; C:ruffle membrane
; IDA:UniProtKB; .
GO
GO:0005086; F:ARF guanyl-nucleotide exchange factor activity
; TAS:Reactome; .
GO
GO:0005154; F:epidermal growth factor receptor binding
; IDA:UniProtKB; .
GO
GO:0005525; F:GTP binding
; IDA:UniProtKB; .
GO
GO:0003924; F:GTPase activity
; TAS:Reactome; .
GO
GO:0031584; P:activation of phospholipase D activity
; IDA:UniProtKB; .
GO
GO:0045176; P:apical protein localization
; IEA:Ensembl; .
GO
GO:0007420; P:brain development
; IEA:Ensembl; .
GO
GO:0016477; P:cell migration
; IDA:UniProtKB; .
GO
GO:0060996; P:dendritic spine development
; IDA:MGI; .
GO
GO:0007173; P:epidermal growth factor receptor signaling pathway
; IEA:Ensembl; .
GO
GO:0006888; P:ER to Golgi vesicle-mediated transport
; TAS:Reactome; .
GO
GO:0045197; P:establishment or maintenance of epithelial cell apical/basal polarity
; IEA:Ensembl; .
GO
GO:0007612; P:learning
; IEA:Ensembl; .
GO
GO:0043066; P:negative regulation of apoptotic process
; IDA:UniProtKB; .
GO
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter
; IDA:UniProtKB; .
GO
GO:0006471; P:protein ADP-ribosylation
; IDA:UniProtKB; .
GO
GO:0061512; P:protein localization to cilium
; IEA:Ensembl; .
GO
GO:0015031; P:protein transport
; IEA:UniProtKB-KW; .
GO
GO:2000377; P:regulation of reactive oxygen species metabolic process
; IDA:UniProtKB; .
GO
GO:0048678; P:response to axon injury
; IEA:Ensembl; .
GO
GO:0006890; P:retrograde vesicle-mediated transport
; Golgi to ER; IGI:WormBase
GO
GO:0007264; P:small GTPase mediated signal transduction
; IEA:InterPro; .
Gene3D
3.40.50.300; -
; 1; .
InterPro
IPR027417; P-loop_NTPase
; .
InterPro
IPR005225; Small_GTP-bd_dom
; .
InterPro
IPR024156; Small_GTPase_ARF
; .
InterPro
IPR006689; Small_GTPase_ARF/SAR
; .
Pfam
PF00025; Arf
; 1; .
PRINTS
PR00328; SAR1GTPBP
; .
SUPFAM
SSF52540; SSF52540
; 1; .
TIGRFAMs
TIGR00231; small_GTP
; 1; .
PROSITE
PS51417; ARF
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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